BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B10SP1|AL429022
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1491 1750 0.0
>3x_Contig1491
Length = 9571
Score = 1750 bits (881), Expect = 0.0
Identities = 903/910 (99%), Gaps = 2/910 (0%)
Strand = Plus / Plus
Query: 7 catcagtatttcatactaaactgagccaaccggtgagaataaacctacacataagattac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6783 catcagtatttcatactaaactgagccaaccggtgagaataaacctacacataagattac 6842
Query: 67 ttgacagcttctgcagcaccacaatctaaccataatgcaaaatgagcctatgtttcaagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6843 ttgacagcttctgcagcaccacaatctaaccataatgcaaaatgagcctatgtttcaagt 6902
Query: 127 gcaagtcgatgagacagaagataccgagtggaacgntatcttaagagctcacggtgtaat 186
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6903 gcaagtcgatgagacagaagataccgagtggaacgatatcttaagagctcacggtgtaat 6962
Query: 187 tccagaaagaccaccatcaccaactgcgcag-tagaagaagcgttagaagaagcattggc 245
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6963 tccagaaagaccaccatcaccaactgcgcagctagaagaagcgttagaagaagcattggc 7022
Query: 246 aaagcaacatgaaaatagactagacggcaaggatctatcagatttggaggatttggaaga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7023 aaagcaacatgaaaatagactagacggcaaggatctatcagatttggaggatttggaaga 7082
Query: 306 tgaagaagatgaggaatttctacaattttataaacagaaacgtctcaatgagatcaagaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7083 tgaagaagatgaggaatttctacaattttataaacagaaacgtctcaatgagatcaagaa 7142
Query: 366 attacaggaaaaggcaaaatttggttcagtatatccaatcagcaaacctgattacaacag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7143 attacaggaaaaggcaaaatttggttcagtatatccaatcagcaaacctgattacaacag 7202
Query: 426 agagatcacagaatgcagtaaaggcactaaaaaatcacaatatgttgatgatggttcttc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7203 agagatcacagaatgcagtaaaggcactaaaaaatcacaatatgttgatgatggttcttc 7262
Query: 486 agagtttgaaggaggggtttatgtgtttgttcatttaacttgtcaagmcaaacttgaaag 545
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7263 agagtttgaaggaggggtttatgtgtttgttcatttaacttgtcaagccaaacttgaaag 7322
Query: 546 aaggttattatctagtatctttgagaaagcagcagccaaattcccccaaatcaaattcgt 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7323 taggttattatctagtatctttgagaaagcagcagccaaattcccccaaatcaaattcgt 7382
Query: 606 ggaaattcctggtaatagagcaatagagaattatccagataacaactgtccgactttgat 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7383 ggaaattcctggtaatagagcaatagagaattatccagataacaactgtccgactttgat 7442
Query: 666 tgtttattacaaaggtgatgtcgtaaaacatttggttacactactcgaacttggtggaaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7443 tgtttattacaaaggtgatgtcgtaaaacatttggttacactactcgaacttggtggaaa 7502
Query: 726 agatactaaattggaagattttgaaagacttatggttgatattggtgcagtagacgagaa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7503 agatactaaattggaagattttgaaagacttatggttgatattggtgcagtagacgagaa 7562
Query: 786 agatggtagattgctaatgaaccacgaagatgattatactaaacaagaamagaaacagag 845
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7563 agatggtagattgctaatgaaccacgaagatgattatactaaacaagaaaagaaacagag 7622
Query: 846 atacggtcataacagtataagatca-gtatcaaaggcaaatttwatgttggtgttggtag 904
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 7623 atacggtcataacagtataagatcaggtatcaaaggcaaatttaatgttggtgttggtag 7682
Query: 905 aaatggccgc 914
||||||||||
Sbjct: 7683 aaatggccgc 7692
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7851
Number of Sequences: 1807
Number of extensions: 7851
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)